Federally Qualified Health Centers (FQHCs) Services

The diversity of federally qualified health centers (FQHCs) allow personalized treatment to each individual. From FQHCs, community health centers and medical centers to management services organizations, long-term care facilities and mental health, behavioral health and addiction treatment facilities, Withum understands the mission and purpose of providing quality advisory, tax and audit services to you so you can treat your patients and stay compliant.

FQHC Services

Our approach is similar to a financial statement auditor approach where not-for-profit and healthcare tax professionals work with our tax-exempt clients on-premises as part of the engagement. From adoption of a formal tax return workplace and timeline and reviewing Form 990 prior to on-site workdays to reviewing written policies and procedures and focusing on high-level tax issues, we understand.

Form 401(k) and 403(b) to pension plans, profit sharing and health and welfare plans, we work extensively with those affected by compliance with the Employee Retirement Income Security Act of 1974 (ERISA) to ensure we are up-to-date with the latest changes and updates. This provides a cost-effective approach to help clients maintain a position of strength through timely compliance.

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Improve your center’s workflow and transparency with scalable outsourced accounting and finance services based on your unique needs. We can serve as your accounting department, provide web-based accounting solutions and manage your in-house staff.

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US health policy , healthcare fund , medical research and development concept with green medical research background.

Why FQHCs Choose Withum

FQHCs are not only unique because they are supported by Federal and state financial assistance to provide services to uninsured and under-insured residents, but also because they are subject to specific key program requirements mandated by HRSA. We incorporate the 18-key program requirements in our audit plans.

340B- Hospitals

Optimize Your 340B Purchasing and Expand Your 340B Program

Withum’s unique software integrates data from all aspects of the program, linking EMRs, e-prescribing systems, contract pharmacies, TPAs and wholesalers as a “one-stop-shop” for all 340B concerns.

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Connect with Our Healthcare Leaders

Erik-Halluska_Web
Partner, Team Leader, Vacation Ownership and FQHCs
Orlando, FL
James Byrne photo in Grey blazer and pink shirt. Withum
Partner, Co-Team Leader, Healthcare Systems and Hospital Services
Red Bank, NJ
Michael-Schoell_Web
Partner
Buffalo, NY
Bryce Jenkins headshot for Withum
Principal, Team Leader, Healthcare Revenue Cycle Management Services
Washington, DC

Federally Qualified Health Centers Related Insights

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IRS Resumes Group Exemption Rulings: What Healthcare and Other Nonprofit Organizations Need to Know 

On January 20, 2026, the Internal Revenue Service (IRS) resumed accepting new applications for group exemption ruling requests by issuing Revenue Procedure (Rev. Proc.) 2026-8. This new guidance ends the moratorium on new applications for group exemption rulings that began in 2020 and introduces new requirements and guidance for applying for and maintaining a group…

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Federal Bill Takes Aim at MSO/Friendly-PC Structures: The Tax Implications

A proposed federal bill targets the management services organization (MSO)/friendly professional corporation (PC) structure that underpins much of physician practice investment. H.R. 10444, the Stop Corporate Takeovers of Physicians Act of 2026, was introduced on September 16, 2026, by Rep. Val Hoyle (D-OR) and 10 cosponsors. It was referred to the House Energy and Commerce…

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Revenue Cycle Optimization: A Strategic Response to FQHC Cost Pressures in 2026 and Beyond

As Federally Qualified Health Centers (FQHCs) navigate an increasingly complex landscape, revenue cycle optimization has become more critical than ever. Medicaid eligibility changes, federal funding concerns and evolving 340B compliance requirements are creating new administrative and operational challenges. By optimizing revenue cycle processes, FQHCs can protect reimbursement, improve financial performance and better position themselves for…

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