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New York Governor Signs 2025-2026 Budget That Includes Business Tax Hikes

On May 10, 2025, New York Governor Hochul signed the 2025-2026 budget bill into law. While there are no major tax changes in the budget bill, several items are worthy of note for taxpayers. Including a payroll tax hike and new rules related to partnership audits. Below is a summary of some of the more important tax changes. We will provide a more detailed analysis of these provisions in the coming days.

Payroll Mobility Tax Hike

The Metropolitan Commuter Transportation Mobility Tax (MCTMT) rate is increased for employers with more than $10 million in payroll. The rate for New York City employers will increase to nearly 0.9% from the current 0.6%. Employers in surrounding areas that are part of the New York City public transportation network, such as the Hudson Valley and Long Island, will see an increase from about 0.3% to about 0.6%. However, certain smaller employers will receive a 50% reduction in their payroll taxes.

The increase is intended to pay for a shortfall in funding for the Metropolitan Transportation Authority’s five-year capital plan. The MCTMT is imposed on certain employers and self-employed individuals engaging in business within the Metropolitan Commuter Transportation District (MCTD). The tax is imposed on employers in the MCTD that are required to withhold state taxes and have a payroll exceeding $312,500 in any calendar quarter. The tax is also imposed on self-employed individuals, including partners, with net earnings from the district exceeding $50,000.

Federal Partnership Audit Conformity

The 2025-2026 budget also conforms New York to the federal partnership audit rules. There was a prior disconnect because New York only requires reporting federal changes to partnership income to the state when there is a federal audit or an amended federal return is filed. However, due to adopting the federal partnership audit rules in 2018, partners subject to these rules are not permitted or required to file amended federal returns. Thus, New York’s federal adjustment reporting mechanism is not triggered.

The New York budget now conforms the state provisions to the federal provisions to ensure adjustments are reported at the state level. However, several partnership issues that are not addressed in the federal provisions, e.g, treatment of nonresident partners and apportionment for multistate partnerships, arise at the state level. In addition, the New York provisions are retroactive to when the federal provisions were enacted. New York partnership taxpayers must analyze these new provisions to ensure proper compliance.

Other Changes

Author: Mike Mcloughlin | [email protected]